Pseudoclavibacter sp. RFBG4

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. RFBG4 is characterized by having a single replicon, indicating a streamlined genomic architecture that may contribute to its adaptability and functional efficiency. The genomic data for this organism is cataloged under the accession number PSYC00000000.1, which serves as a reference for researchers studying its genetic makeup and potential applications. The presence of a single replicon can suggest a stable genetic structure, which may provide advantages in specific environments, such as reduced genetic load and simplified regulation of gene expression. This trait is often observed in some microbial species that thrive in particular ecological niches, allowing them to maintain essential functions without the complexities associated with multiple replicons. In terms of ecological insight, the streamlined genome of Pseudoclavibacter sp. RFBG4 may facilitate its survival in environments with limited resources or specific challenges. The organism's genetic simplicity could enable quick adaptation to changing conditions, enhancing its ecological resilience. Such traits are crucial for microorganisms that inhabit diverse and often fluctuating environments, where competition and resource availability can impact survival and proliferation.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. RFBG4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. RFBG4 RFBG4_704, whole genome shotgun

Gene Summary

Adenine Count

635454 bp

Thymine Count

640454 bp

Guanine Count

1381739 bp

Cytosine Count

1376795 bp

Genome Length

4034452 bp

Protein-coding Genes

3611 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr family transcriptional regulatorC5E10_17585Not AvailablePositive3801786 - 380242122990.5
atp-dependent rna helicaseC5E10_17590Not AvailablePositive3802411 - 380423166603.2
beta-glucosidaseC5E10_17595Not AvailablePositive3804416 - 380585252689.9
haloacid dehalogenaseC5E10_17600Not AvailablePositive3805849 - 380652024345.9
glycine/betaine abc transporter substrate-binding proteinC5E10_17605Not AvailableNegative3806639 - 380753532365.1
glycine/betaine abc transporter permeaseC5E10_17610Not AvailableNegative3807580 - 380855734257.8
glycine betaine abc transporter atp-binding proteinC5E10_17615Not AvailableNegative3808554 - 380982245132.4
hypothetical proteinC5E10_17620Not AvailablePositive3810283 - 381112531385.1
oxidoreductaseC5E10_17625Not AvailablePositive3811146 - 381226038937.3
transcription antiterminator lictC5E10_17630Not AvailablePositive3812383 - 381320730270.0

Displaying genes 3491 – 3500 of 3694 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.