Pseudoclavibacter sp. RFBG4

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. RFBG4 is characterized by having a single replicon, indicating a streamlined genomic architecture that may contribute to its adaptability and functional efficiency. The genomic data for this organism is cataloged under the accession number PSYC00000000.1, which serves as a reference for researchers studying its genetic makeup and potential applications. The presence of a single replicon can suggest a stable genetic structure, which may provide advantages in specific environments, such as reduced genetic load and simplified regulation of gene expression. This trait is often observed in some microbial species that thrive in particular ecological niches, allowing them to maintain essential functions without the complexities associated with multiple replicons. In terms of ecological insight, the streamlined genome of Pseudoclavibacter sp. RFBG4 may facilitate its survival in environments with limited resources or specific challenges. The organism's genetic simplicity could enable quick adaptation to changing conditions, enhancing its ecological resilience. Such traits are crucial for microorganisms that inhabit diverse and often fluctuating environments, where competition and resource availability can impact survival and proliferation.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. RFBG4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. RFBG4 RFBG4_704, whole genome shotgun

Gene Summary

Adenine Count

635454 bp

Thymine Count

640454 bp

Guanine Count

1381739 bp

Cytosine Count

1376795 bp

Genome Length

4034452 bp

Protein-coding Genes

3611 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-directed rna polymerase subunit alphaC5E10_12030Not AvailableNegative2627165 - 262816035921.4
30s ribosomal protein s11C5E10_12035Not AvailableNegative2628310 - 262870813845.6
30s ribosomal protein s13C5E10_12040Not AvailableNegative2628751 - 262912514042.0
50s ribosomal protein l36C5E10_12045Not AvailableNegative2629318 - 26294314373.59
translation initiation factor if-1C5E10_12050Not AvailableNegative2629501 - 26297228408.38
type i methionyl aminopeptidaseC5E10_12055Not AvailableNegative2629873 - 263071229117.5
hypothetical proteinC5E10_12060Not AvailableNegative2630755 - 263124016946.5
hypothetical proteinC5E10_12065Not AvailableNegative2631689 - 263267234299.5
carnitine dehydrataseC5E10_12070Not AvailableNegative2632852 - 263397638818.5
acyl-coa dehydrogenaseC5E10_12075Not AvailableNegative2634013 - 263518541882.4

Displaying genes 2401 – 2410 of 3694 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.