Pseudoclavibacter sp. RFBG4

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. RFBG4 is characterized by having a single replicon, indicating a streamlined genomic architecture that may contribute to its adaptability and functional efficiency. The genomic data for this organism is cataloged under the accession number PSYC00000000.1, which serves as a reference for researchers studying its genetic makeup and potential applications. The presence of a single replicon can suggest a stable genetic structure, which may provide advantages in specific environments, such as reduced genetic load and simplified regulation of gene expression. This trait is often observed in some microbial species that thrive in particular ecological niches, allowing them to maintain essential functions without the complexities associated with multiple replicons. In terms of ecological insight, the streamlined genome of Pseudoclavibacter sp. RFBG4 may facilitate its survival in environments with limited resources or specific challenges. The organism's genetic simplicity could enable quick adaptation to changing conditions, enhancing its ecological resilience. Such traits are crucial for microorganisms that inhabit diverse and often fluctuating environments, where competition and resource availability can impact survival and proliferation.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. RFBG4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. RFBG4 RFBG4_704, whole genome shotgun

Gene Summary

Adenine Count

635454 bp

Thymine Count

640454 bp

Guanine Count

1381739 bp

Cytosine Count

1376795 bp

Genome Length

4034452 bp

Protein-coding Genes

3611 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
f0f1 atp synthase subunit gammaC5E10_05705Not AvailablePositive1246416 - 124731833211.4
f0f1 atp synthase subunit betaC5E10_05710Not AvailablePositive1247349 - 124881553468.5
f0f1 atp synthase subunit epsilonC5E10_05715Not AvailablePositive1248818 - 12490969259.07
peroxide stress protein yaaaC5E10_05720Not AvailablePositive1249093 - 124990829042.3
hypothetical proteinC5E10_05730Not AvailablePositive1250964 - 125210340443.7
hypothetical proteinC5E10_05735Not AvailablePositive1252093 - 1255050103698.0
asparaginaseC5E10_05740Not AvailableNegative1255016 - 125602934467.5
zinc metalloproteaseC5E10_05745Not AvailablePositive1256132 - 125747847067.4
aaa family atpaseC5E10_05750Not AvailablePositive1257746 - 125860631396.6
duf58 domain-containing proteinC5E10_05755Not AvailablePositive1258609 - 125950533559.3

Displaying genes 1151 – 1160 of 3694 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.