Pontibacter arcticus

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter arcticus is a Gram-negative bacterium characterized by its rod-shaped morphology. It is notable for possessing a single replicon, which indicates a streamlined genomic organization. The complete genome of Pontibacter arcticus is accessible through the accession number QMDV00000000.1. This bacterium is part of the larger Pontibacter genus, which is known for its adaptability to extreme environments. While specific ecological roles of Pontibacter arcticus have not been detailed in the provided traits, the presence of such organisms in extreme habitats often suggests their potential contributions to biogeochemical cycles and their roles in microbial communities. Overall, the characteristics of Pontibacter arcticus highlight its potential importance in microbial ecology, particularly in polar or extreme environments where it may interact with other microbial species and contribute to ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter arcticus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter arcticus strain 2b14 b14_scaffold7, whole genome

Gene Summary

Adenine Count

1023326 bp

Thymine Count

1032491 bp

Guanine Count

860141 bp

Cytosine Count

857473 bp

Genome Length

3773432 bp

Protein-coding Genes

3235 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-leuNot AvailableNot AvailablePositive6200 - 6281Not Available
trigger factorDP923_00040Not AvailablePositive6355 - 767750570.5
atp-dependent clp protease proteolytic subunitDP923_00045Not AvailablePositive7765 - 846325908.3
atp-dependent clp protease atp-binding subunit clpxDP923_00050Not AvailablePositive8813 - 1003645560.2
lipid-a-disaccharide synthaseDP923_00055Not AvailableNegative10147 - 1126242769.0
6-carboxytetrahydropterin synthaseDP923_00060Not AvailableNegative11332 - 1174815967.2
iron abc transporter permeaseDP923_00065Not AvailableNegative11749 - 1275636351.7
iron abc transporter substrate-binding proteinDP923_00070Not AvailableNegative12753 - 1364033719.2
adp-glyceromanno-heptose 6-epimeraseDP923_00075Not AvailablePositive13757 - 1472537115.0
hypothetical proteinDP923_00080Not AvailableNegative14827 - 1545624191.4

Displaying genes 11 – 20 of 3290 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.