Pontibacter arcticus

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter arcticus is a Gram-negative bacterium characterized by its rod-shaped morphology. It is notable for possessing a single replicon, which indicates a streamlined genomic organization. The complete genome of Pontibacter arcticus is accessible through the accession number QMDV00000000.1. This bacterium is part of the larger Pontibacter genus, which is known for its adaptability to extreme environments. While specific ecological roles of Pontibacter arcticus have not been detailed in the provided traits, the presence of such organisms in extreme habitats often suggests their potential contributions to biogeochemical cycles and their roles in microbial communities. Overall, the characteristics of Pontibacter arcticus highlight its potential importance in microbial ecology, particularly in polar or extreme environments where it may interact with other microbial species and contribute to ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter arcticus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter arcticus strain 2b14 b14_scaffold7, whole genome

Gene Summary

Adenine Count

1023326 bp

Thymine Count

1032491 bp

Guanine Count

860141 bp

Cytosine Count

857473 bp

Genome Length

3773432 bp

Protein-coding Genes

3235 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylacetate-coa oxygenase subunit paaiDP923_13085Not AvailableNegative3023996 - 302475128367.7
phenylacetic acid degradation bDP923_13090Not AvailableNegative3024754 - 302538624177.6
1,2-phenylacetyl-coa epoxidase subunit aDP923_13095Not AvailableNegative3025458 - 302644437446.8
tetr/acrr family transcriptional regulatorDP923_13100Not AvailableNegative3026552 - 302713621655.0
enoyl-coa hydratase/isomerase family proteinDP923_13105Not AvailablePositive3027329 - 302810228654.6
fatty acid hydroxylaseDP923_13110Not AvailablePositive3028153 - 302863818815.4
helix-turn-helix-type transcriptional regulatorDP923_13115Not AvailablePositive3028619 - 302950934264.5
rna polymerase sigma factorDP923_13120Not AvailablePositive3029759 - 303027419939.9
phytoene desaturaseDP923_13125Not AvailablePositive3030304 - 303180056168.3
phytoene/squalene synthase family proteinDP923_13130Not AvailablePositive3031822 - 303265532395.3

Displaying genes 2601 – 2610 of 3290 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.