Pontibacter arcticus

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter arcticus is a Gram-negative bacterium characterized by its rod-shaped morphology. It is notable for possessing a single replicon, which indicates a streamlined genomic organization. The complete genome of Pontibacter arcticus is accessible through the accession number QMDV00000000.1. This bacterium is part of the larger Pontibacter genus, which is known for its adaptability to extreme environments. While specific ecological roles of Pontibacter arcticus have not been detailed in the provided traits, the presence of such organisms in extreme habitats often suggests their potential contributions to biogeochemical cycles and their roles in microbial communities. Overall, the characteristics of Pontibacter arcticus highlight its potential importance in microbial ecology, particularly in polar or extreme environments where it may interact with other microbial species and contribute to ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter arcticus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter arcticus strain 2b14 b14_scaffold7, whole genome

Gene Summary

Adenine Count

1023326 bp

Thymine Count

1032491 bp

Guanine Count

860141 bp

Cytosine Count

857473 bp

Genome Length

3773432 bp

Protein-coding Genes

3235 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
indole-3-glycerol phosphate synthase trpcDP923_08035Not AvailablePositive1864718 - 186553330284.6
phosphoribosylanthranilate isomeraseDP923_08040Not AvailablePositive1865530 - 186617424304.1
tryptophan synthase subunit betaDP923_08045Not AvailablePositive1866297 - 186748743214.5
tryptophan synthase subunit alphaDP923_08050Not AvailablePositive1867477 - 186825929125.2
3-deoxy-7-phosphoheptulonate synthaseDP923_08055Not AvailablePositive1868256 - 186926637693.8
s9 family peptidaseDP923_08060Not AvailableNegative1869481 - 187151476718.3
imidazole glycerol phosphate synthase subunit hishDP923_08065Not AvailablePositive1871840 - 187242121382.7
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseDP923_08070Not AvailablePositive1872418 - 187314025818.1
imidazole glycerol phosphate synthase subunit hisfDP923_08075Not AvailablePositive1873134 - 187389227168.5
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphataseDP923_08080Not AvailablePositive1873965 - 187457322358.7

Displaying genes 1601 – 1610 of 3290 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.