Pontibacter arcticus

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter arcticus is a Gram-negative bacterium characterized by its rod-shaped morphology. It is notable for possessing a single replicon, which indicates a streamlined genomic organization. The complete genome of Pontibacter arcticus is accessible through the accession number QMDV00000000.1. This bacterium is part of the larger Pontibacter genus, which is known for its adaptability to extreme environments. While specific ecological roles of Pontibacter arcticus have not been detailed in the provided traits, the presence of such organisms in extreme habitats often suggests their potential contributions to biogeochemical cycles and their roles in microbial communities. Overall, the characteristics of Pontibacter arcticus highlight its potential importance in microbial ecology, particularly in polar or extreme environments where it may interact with other microbial species and contribute to ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter arcticus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter arcticus strain 2b14 b14_scaffold7, whole genome

Gene Summary

Adenine Count

1023326 bp

Thymine Count

1032491 bp

Guanine Count

860141 bp

Cytosine Count

857473 bp

Genome Length

3773432 bp

Protein-coding Genes

3235 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-serine ammonia-lyase, iron-sulfur-dependent, subunit alphaDP923_05185Not AvailablePositive1165156 - 116606431805.3
pyridoxal phosphate-dependent aminotransferaseDP923_05190Not AvailablePositive1166242 - 116748345118.2
transcriptional regulator asncDP923_05195Not AvailableNegative1167736 - 116819417190.1
hypothetical proteinDP923_05200Not AvailablePositive1168354 - 116931036889.4
hypothetical proteinDP923_05205Not AvailablePositive1169379 - 11695888115.01
iron-sulfur cluster-binding proteinDP923_05210Not AvailableNegative1169603 - 117097351000.5
peptidase m28DP923_05215Not AvailableNegative1171120 - 117277560447.8
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseDP923_05220Not AvailableNegative1172811 - 117329617578.5
duf1264 domain-containing proteinDP923_05225Not AvailablePositive1173569 - 117432427970.3
alkene reductaseDP923_05230Not AvailableNegative1174838 - 117593840773.4

Displaying genes 1041 – 1050 of 3290 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.