Solitalea longa str. HR-AV

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Solitalea

Description

Solitalea longa strain HR-AV is characterized by having a single replicon, which indicates a simplified genomic structure. This trait may suggest a streamlined metabolic capability, potentially allowing for efficient adaptation to its environment. The strain is cataloged under the accession number PQVF00000000.1, providing a reference for researchers interested in its genetic and phenotypic characteristics. The existence of a single replicon is notable in the context of bacterial taxonomy, as it can influence aspects of replication, gene regulation, and overall cellular function. Such a genomic configuration may facilitate a more straightforward approach to genetic studies, particularly in understanding the evolutionary adaptations of Solitalea longa in its ecological niche. In terms of ecological insight, the streamlined genetic architecture of Solitalea longa suggests it may play a specialized role in its habitat, potentially thriving in specific environmental conditions where resource optimization is crucial. This adaptation might allow it to efficiently exploit available nutrients, thereby influencing microbial community dynamics and interactions within its ecosystem. Overall, the traits of Solitalea longa strain HR-AV highlight its potential significance in microbiological research and ecological studies, particularly in understanding the complexities of microbial life and its adaptations.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSolitalea
SpeciesSolitalea longa
StrainHR-AV

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Solitalea longa strain HR-AV HR-AV_36, whole genome shotgun

Gene Summary

Adenine Count

1393005 bp

Thymine Count

1390559 bp

Guanine Count

866731 bp

Cytosine Count

867282 bp

Genome Length

4517600 bp

Protein-coding Genes

3775 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cdp-diacylglycerol--serine o-phosphatidyltransferaseC3K47_12635Not AvailablePositive2938401 - 293910526614.3
phosphoribosylformylglycinamidine synthaseC3K47_12640Not AvailablePositive2939156 - 29394079256.4
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseC3K47_12645Not AvailableNegative2939524 - 294000918364.4
signal peptide peptidase sppaC3K47_12650Not AvailablePositive2940149 - 294192164993.1
osmc family peroxiredoxinC3K47_12655Not AvailablePositive2941954 - 294236414458.0
dna polymerase/3'-5' exonuclease polxC3K47_12660Not AvailablePositive2942506 - 294417362504.1
histidine phosphatase family proteinC3K47_12665Not AvailablePositive2944217 - 294470818456.3
ammonia channel proteinC3K47_12670Not AvailableNegative2944770 - 294611947665.8
dna-protecting protein dpraC3K47_12675Not AvailableNegative2946209 - 294730640649.3
16s rrna (guanine(527)-n(7))-methyltransferase rsmgC3K47_12680Not AvailableNegative2947319 - 294794223646.6

Displaying genes 2521 – 2530 of 3848 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.