Solitalea longa str. HR-AV

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Solitalea

Description

Solitalea longa strain HR-AV is characterized by having a single replicon, which indicates a simplified genomic structure. This trait may suggest a streamlined metabolic capability, potentially allowing for efficient adaptation to its environment. The strain is cataloged under the accession number PQVF00000000.1, providing a reference for researchers interested in its genetic and phenotypic characteristics. The existence of a single replicon is notable in the context of bacterial taxonomy, as it can influence aspects of replication, gene regulation, and overall cellular function. Such a genomic configuration may facilitate a more straightforward approach to genetic studies, particularly in understanding the evolutionary adaptations of Solitalea longa in its ecological niche. In terms of ecological insight, the streamlined genetic architecture of Solitalea longa suggests it may play a specialized role in its habitat, potentially thriving in specific environmental conditions where resource optimization is crucial. This adaptation might allow it to efficiently exploit available nutrients, thereby influencing microbial community dynamics and interactions within its ecosystem. Overall, the traits of Solitalea longa strain HR-AV highlight its potential significance in microbiological research and ecological studies, particularly in understanding the complexities of microbial life and its adaptations.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSolitalea
SpeciesSolitalea longa
StrainHR-AV

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Solitalea longa strain HR-AV HR-AV_36, whole genome shotgun

Gene Summary

Adenine Count

1393005 bp

Thymine Count

1390559 bp

Guanine Count

866731 bp

Cytosine Count

867282 bp

Genome Length

4517600 bp

Protein-coding Genes

3775 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhomboid family intramembrane serine proteaseC3K47_00705Not AvailableNegative154681 - 15531623837.4
dna-binding transcriptional regulator oxyrC3K47_00710Not AvailableNegative155419 - 15635435730.6
hypothetical proteinC3K47_00720Not AvailableNegative156757 - 15849667148.2
pterin-4-alpha-carbinolamine dehydrataseC3K47_00725Not AvailableNegative158586 - 1588198909.58
mmcq-like proteinC3K47_00730Not AvailableNegative158860 - 15921613546.3
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoC3K47_00735Not AvailableNegative159250 - 15994825260.4
rna methyltransferaseC3K47_00740Not AvailableNegative160035 - 16122544953.9
hypothetical proteinC3K47_00745Not AvailablePositive161277 - 16165413976.5
hypothetical proteinC3K47_00750Not AvailableNegative161922 - 16268028588.8
hypothetical proteinC3K47_00755Not AvailablePositive162813 - 16459467493.6

Displaying genes 151 – 160 of 3848 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.