Solitalea longa str. HR-AV

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Solitalea

Description

Solitalea longa strain HR-AV is characterized by having a single replicon, which indicates a simplified genomic structure. This trait may suggest a streamlined metabolic capability, potentially allowing for efficient adaptation to its environment. The strain is cataloged under the accession number PQVF00000000.1, providing a reference for researchers interested in its genetic and phenotypic characteristics. The existence of a single replicon is notable in the context of bacterial taxonomy, as it can influence aspects of replication, gene regulation, and overall cellular function. Such a genomic configuration may facilitate a more straightforward approach to genetic studies, particularly in understanding the evolutionary adaptations of Solitalea longa in its ecological niche. In terms of ecological insight, the streamlined genetic architecture of Solitalea longa suggests it may play a specialized role in its habitat, potentially thriving in specific environmental conditions where resource optimization is crucial. This adaptation might allow it to efficiently exploit available nutrients, thereby influencing microbial community dynamics and interactions within its ecosystem. Overall, the traits of Solitalea longa strain HR-AV highlight its potential significance in microbiological research and ecological studies, particularly in understanding the complexities of microbial life and its adaptations.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSolitalea
SpeciesSolitalea longa
StrainHR-AV

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Solitalea longa strain HR-AV HR-AV_36, whole genome shotgun

Gene Summary

Adenine Count

1393005 bp

Thymine Count

1390559 bp

Guanine Count

866731 bp

Cytosine Count

867282 bp

Genome Length

4517600 bp

Protein-coding Genes

3775 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anti-sigma factorC3K47_05240Not AvailableNegative1206868 - 120805244474.8
hypothetical proteinC3K47_05245Not AvailableNegative1208155 - 120874522774.7
rna polymerase subunit sigma-70C3K47_05250Not AvailablePositive1209577 - 121016422976.6
anti-sigma factorC3K47_05255Not AvailablePositive1210244 - 121138941901.8
susc/raga family tonb-linked outer membrane proteinC3K47_05260Not AvailablePositive1211626 - 1214958122422.0
hypothetical proteinC3K47_05265Not AvailablePositive1214979 - 121637052629.5
multidrug abc transporter atp-binding proteinC3K47_05270Not AvailablePositive1216484 - 121741634755.8
abc transporterC3K47_05275Not AvailablePositive1217419 - 121971985543.3
dna mismatch repair proteinC3K47_05280Not AvailablePositive1219726 - 122107850470.3
dna mismatch repair proteinC3K47_05285Not AvailablePositive1221059 - 122238749840.3

Displaying genes 1051 – 1060 of 3848 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.