Candidatus Tokpelaia sp. JSC188

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Genus

Candidatus Tokpelaia

Description

Candidatus Tokpelaia sp. JSC188 is characterized by having a single replicon, which is indicative of its genomic structure. This trait may suggest a streamlined genome organization that can be advantageous for certain metabolic processes and cellular functions. The organism is cataloged under the accession number QENB00000000.1, which serves as a reference for genetic and genomic studies. The single replicon may imply that Candidatus Tokpelaia sp. JSC188 has adapted to a specific ecological niche, potentially influencing its survival and proliferation in its natural habitat. This trait can affect its genetic stability and capacity for horizontal gene transfer, which are important factors in microbial evolution and adaptation. Understanding the genomic structure of Candidatus Tokpelaia sp. JSC188 can provide insights into its ecological role and potential interactions with other microorganisms within its environment. The streamlined genomic architecture may also reflect a specialization that allows this organism to thrive under particular conditions, possibly impacting nutrient cycling or other ecological functions in its ecosystem. Such insights underscore the importance of studying microbial genomes to elucidate their roles in broader biological and ecological contexts.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Tokpelaia sp. JSC188 JSC188_contig_9, whole genome

Gene Summary

Adenine Count

388444 bp

Thymine Count

391353 bp

Guanine Count

261305 bp

Cytosine Count

257878 bp

Genome Length

1298980 bp

Protein-coding Genes

1066 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazoleglycerol-phosphate dehydrataseJSC188_000993Not AvailablePositive1156119 - 115671522069.6
glutamine amidotransferaseJSC188_000994Not AvailablePositive1156721 - 115737123740.0
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseJSC188_000995Not AvailablePositive1157368 - 115811126791.3
imidazoleglycerol-phosphate synthaseJSC188_000996Not AvailablePositive1158108 - 115890528414.0
phosphoribosyl-atp pyrophosphohydrolaseJSC188_000997Not AvailablePositive1158850 - 115926015557.6
type i pantothenate kinaseJSC188_000998Not AvailablePositive1159250 - 116020936862.0
cytochrome o ubiquinol oxidase operon protein cyodJSC188_000999Not AvailableNegative1160442 - 116083414982.6
cytochrome o ubiquinol oxidase subunit iiiJSC188_001000Not AvailableNegative1160834 - 116143622736.0
cytochrome o ubiquinol oxidase subunit iJSC188_001001Not AvailableNegative1161433 - 116345475464.0
cytochrome o ubiquinol oxidase subunit iiJSC188_001002Not AvailableNegative1163515 - 116448336319.2

Displaying genes 991 – 1000 of 1110 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.