Haloferax sp. Atlit-12N

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloferax

Description

Haloferax sp. Atlit-12N is a Gram-negative, rod-shaped archaeon that possesses flagella, which suggests motility in its environment. The presence of flagella may facilitate its movement in saline habitats, characteristic of many members of the Haloferax genus. This organism has a single replicon, indicating a streamlined genetic organization, which can be advantageous for efficient replication and adaptation in fluctuating conditions. The accession number for Haloferax sp. Atlit-12N is PSYW00000000.1, which can be used for further genomic studies or comparisons with other haloarchaea. The genomic data associated with this accession may provide insights into its metabolic pathways and potential ecological roles in hypersaline environments. In terms of ecological insight, the traits of Haloferax sp. Atlit-12N suggest that it is well-adapted to extreme saline conditions. The motility offered by flagella may enable it to navigate to optimal microenvironments for growth and survival, which is crucial in ecosystems where salinity levels can fluctuate drastically. Understanding the adaptations of such extremophiles contributes to our knowledge of microbial diversity and survival strategies in extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloferax
SpeciesHaloferax sp. Atlit-12N
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Haloferax sp. Atlit-12N
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloferax sp. Atlit-12N P_contig000133, whole genome shotgun

Gene Summary

Adenine Count

700457 bp

Thymine Count

685920 bp

Guanine Count

1313763 bp

Cytosine Count

1311936 bp

Genome Length

4012076 bp

Protein-coding Genes

3929 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh dehydrogenase fad-containing subunitC5B90_16255Not AvailablePositive3230671 - 323210750197.6
formate dehydrogenase subunit alphaC5B90_16260Not AvailablePositive3232104 - 3235430119445.0
alpha-n-arabinofuranosidaseC5B90_16265Not AvailablePositive3236772 - 323830757352.4
exo-alpha-sialidaseC5B90_16270Not AvailablePositive3238386 - 323972047369.3
hypothetical proteinC5B90_16275Not AvailableNegative3239723 - 324043325143.1
carbohydrate abc transporter permeaseC5B90_16280Not AvailableNegative3240430 - 324130532593.3
abc transporter permeaseC5B90_16285Not AvailableNegative3241298 - 324217332864.4
abc transporter substrate-binding proteinC5B90_16290Not AvailableNegative3242237 - 324361650322.0
sugar abc transporter atp-binding proteinC5B90_16295Not AvailablePositive3243824 - 324496642199.4
fumarylacetoacetate hydrolaseC5B90_16300Not AvailableNegative3245206 - 324607531947.9

Displaying genes 3221 – 3230 of 3984 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.