Holophagae bacterium

Kingdom

Pseudomonadati

Phylum

Acidobacteriota

Class

Holophagae

Order

Family

Genus

Description

Holophagae is a class of bacteria characterized by its unique evolutionary traits and ecological roles. Notably, Holophagae possesses a single replicon, which is indicative of its genomic structure and replication strategy. This single replicon may contribute to its adaptability and efficiency in various environments. The accession number for Holophagae is PQAJ00000000.1, which links to its genomic data and allows for further exploration of its genetic makeup. Such accessions are crucial for researchers aiming to study the species' characteristics, metabolic pathways, and potential applications. Holophagae is part of the broader group of bacteria that play significant roles in nutrient cycling within ecosystems. They are often involved in the degradation of organic materials, contributing to the breakdown of complex compounds. This function is essential for maintaining soil health and supporting plant growth, as it aids in the recycling of nutrients. The ecological insight surrounding Holophagae highlights its importance in biogeochemical cycles. By facilitating the decomposition of organic matter, Holophagae contributes to the overall functioning of ecosystems, impacting both microbial communities and higher trophic levels. Understanding the characteristics and roles of this bacterium can provide valuable information for environmental management and conservation efforts.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Holophagae bacterium isolate FeB_10 contig_16132, whole

Gene Summary

Adenine Count

640403 bp

Thymine Count

636050 bp

Guanine Count

1476257 bp

Cytosine Count

1480490 bp

Genome Length

4236048 bp

Protein-coding Genes

3545 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrophobe/amphiphile efflux-1 family rnd transporterC3F15_04240Not AvailableNegative1006007 - 1009162113625.0
efflux transporter periplasmic adaptor subunitC3F15_04245Not AvailableNegative1009165 - 101035242091.7
hypothetical proteinC3F15_04250Not AvailablePositive1010446 - 101242871021.9
hypothetical proteinC3F15_04255Not AvailablePositive1012463 - 101392652374.2
duf3300 domain-containing proteinC3F15_04260Not AvailablePositive1014284 - 101557344332.3
duf2950 domain-containing proteinC3F15_04265Not AvailablePositive1015577 - 101655434544.5
ai-2e family transporterC3F15_04270Not AvailableNegative1016576 - 101769138462.6
efflux transporter periplasmic adaptor subunitC3F15_04275Not AvailablePositive1018013 - 101918541490.3
hydrophobe/amphiphile efflux-1 family rnd transporterC3F15_04280Not AvailablePositive1019190 - 1022260110085.0
hypothetical proteinC3F15_04285Not AvailableNegative1022261 - 10224837533.36

Displaying genes 841 – 850 of 1083 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.