Holophagae bacterium

Kingdom

Pseudomonadati

Phylum

Acidobacteriota

Class

Holophagae

Order

Family

Genus

Description

Holophagae is a class of bacteria characterized by its unique evolutionary traits and ecological roles. Notably, Holophagae possesses a single replicon, which is indicative of its genomic structure and replication strategy. This single replicon may contribute to its adaptability and efficiency in various environments. The accession number for Holophagae is PQAJ00000000.1, which links to its genomic data and allows for further exploration of its genetic makeup. Such accessions are crucial for researchers aiming to study the species' characteristics, metabolic pathways, and potential applications. Holophagae is part of the broader group of bacteria that play significant roles in nutrient cycling within ecosystems. They are often involved in the degradation of organic materials, contributing to the breakdown of complex compounds. This function is essential for maintaining soil health and supporting plant growth, as it aids in the recycling of nutrients. The ecological insight surrounding Holophagae highlights its importance in biogeochemical cycles. By facilitating the decomposition of organic matter, Holophagae contributes to the overall functioning of ecosystems, impacting both microbial communities and higher trophic levels. Understanding the characteristics and roles of this bacterium can provide valuable information for environmental management and conservation efforts.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Holophagae bacterium


Gene Summary

Adenine Count

640403 bp

Thymine Count

636050 bp

Guanine Count

1476257 bp

Cytosine Count

1480490 bp

Genome Length

4236048 bp

Protein-coding Genes

3545 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive13329 - 13707Not Available
iron abc transporterC3F15_00050Not AvailableNegative13261 - 1425934170.0
hypothetical proteinC3F15_00055Not AvailableNegative14256 - 1481920147.2
nadh-dependent flavin oxidoreductaseC3F15_00060Not AvailableNegative14820 - 1540320390.1
amino acid permeaseC3F15_00065Not AvailablePositive15724 - 1719351959.7
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive15876 - 15974Not Available
hypothetical proteinC3F15_00070Not AvailableNegative17216 - 1798328021.8
hypothetical proteinC3F15_00075Not AvailableNegative17984 - 1933851515.0
hypothetical proteinC3F15_00080Not AvailableNegative19335 - 2184887908.7
hypothetical proteinC3F15_00085Not AvailableNegative21882 - 2327652065.2

Displaying genes 11 – 20 of 1083 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.