Pseudomonas sp. DTU12.3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. DTU12.3 is characterized by possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of this bacterial strain is documented under the accession number NZ_CP027218.1, providing a reference point for further genomic analysis and comparisons within the Pseudomonas genus. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant environments. This adaptability is often linked to their capacity to utilize a wide range of organic compounds as carbon and energy sources, which may be a significant trait of Pseudomonas sp. DTU12.3 as well. Given its classification within the Pseudomonas genus, Pseudomonas sp. DTU12.3 may play a role in biogeochemical cycles, such as nitrogen fixation or the degradation of pollutants, although specific functional traits were not provided in the current context. The presence of a single replicon may also suggest a certain evolutionary efficiency, potentially allowing for rapid responses to environmental changes. Understanding the genomic characteristics of Pseudomonas sp. DTU12.3 can provide insights into its ecological roles and potential applications in biotechnology, particularly in bioremediation or agricultural settings. Further research into its metabolic capabilities and interactions within its ecosystem could elucidate its significance in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. DTU12.3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. DTU12.3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. DTU12.3 chromosome, complete genome.

Gene Summary

Adenine Count

1275503 bp

Thymine Count

1265963 bp

Guanine Count

1859052 bp

Cytosine Count

1867951 bp

Genome Length

6268469 bp

Protein-coding Genes

5487 genes

Non-Coding Genes

138 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
malonate decarboxylase subunit deltaC2E19_RS27730Not AvailableNegative6019696 - 601999510658.8
triphosphoribosyl-dephospho-coa synthaseC2E19_RS27735Not AvailableNegative6019995 - 602086730639.8
malonate decarboxylase subunit alphaC2E19_RS27740Not AvailableNegative6020867 - 602253761508.1
duf6124 family proteinC2E19_RS27745Not AvailableNegative6022874 - 602323913025.4
chemotaxis protein chewC2E19_RS27750Not AvailableNegative6023775 - 602424517282.3
hpt domain-containing proteinC2E19_RS27755Not AvailableNegative6024238 - 6030147218108.0
methyl-accepting chemotaxis proteinC2E19_RS27760Not AvailableNegative6030159 - 603221973322.8
chemotaxis protein chewC2E19_RS27765Not AvailableNegative6032363 - 603290220500.9
twitching motility response regulator pilhC2E19_RS27770Not AvailableNegative6032913 - 603327813358.1
twitching motility response regulator pilgC2E19_RS27775Not AvailableNegative6033339 - 603374314566.8

Displaying genes 5391 – 5400 of 5625 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.