Vibrio sp. F12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F12 is characterized by having four replicons, indicating a complex genome structure that may contribute to its adaptability and potential metabolic versatility. The organism is documented in several sequence accessions: SYUK00000000.1, SYUL00000000.1, SYUM00000000.1, and SYUO00000000.1. These accessions provide a foundational basis for further genomic studies and bioinformatics analyses regarding this species. The presence of multiple replicons could suggest mechanisms for enhanced gene regulation and horizontal gene transfer, which are often vital for survival in diverse environments, particularly in aquatic ecosystems where many Vibrio species are found. The adaptability of Vibrio sp. F12 may allow it to thrive in varying environmental conditions, potentially impacting the microbial dynamics within its habitat. Given the ecological role of Vibrio species as both pathogens and beneficial microbes in marine environments, understanding the genomic characteristics of Vibrio sp. F12 could provide insights into its ecological interactions. This organism may contribute to nutrient cycling or play a role in the health of marine organisms, highlighting the importance of studying its genomic features for a comprehensive understanding of its biological and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F12 strain 10N.286.45.A3 10N.286.45.A3_contig_142,

Gene Summary

Adenine Count

1498938 bp

Thymine Count

1486696 bp

Guanine Count

1174543 bp

Cytosine Count

1192341 bp

Genome Length

5371875 bp

Protein-coding Genes

4521 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exem/nuch family extracellular endonucleaseFCV61_02210Not AvailableNegative534907 - 53750194455.6
tryptophan--trna ligaseFCV61_02215Not AvailableNegative537887 - 53890337645.1
phosphoglycolate phosphataseFCV61_02220Not AvailableNegative539055 - 53974124688.2
ribulose-phosphate 3-epimeraseFCV61_02225Not AvailableNegative539844 - 54051824449.7
dam family site-specific dna-(adenine-n6)-methyltransferaseFCV61_02230Not AvailableNegative540723 - 54156831974.0
cell division protein damxFCV61_02235Not AvailableNegative541638 - 54315556280.2
3-dehydroquinate synthaseFCV61_02240Not AvailableNegative543235 - 54432339559.9
shikimate kinase arokFCV61_02245Not AvailableNegative544349 - 54486719305.9
type iv pilus secretin pilq family proteinFCV61_02250Not AvailableNegative545044 - 54673861469.7
pilus assembly protein pilpFCV61_02255Not AvailableNegative546798 - 54731619228.5

Displaying genes 491 – 500 of 18904 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.