Vibrio sp. F12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F12 is characterized by having four replicons, indicating a complex genome structure that may contribute to its adaptability and potential metabolic versatility. The organism is documented in several sequence accessions: SYUK00000000.1, SYUL00000000.1, SYUM00000000.1, and SYUO00000000.1. These accessions provide a foundational basis for further genomic studies and bioinformatics analyses regarding this species. The presence of multiple replicons could suggest mechanisms for enhanced gene regulation and horizontal gene transfer, which are often vital for survival in diverse environments, particularly in aquatic ecosystems where many Vibrio species are found. The adaptability of Vibrio sp. F12 may allow it to thrive in varying environmental conditions, potentially impacting the microbial dynamics within its habitat. Given the ecological role of Vibrio species as both pathogens and beneficial microbes in marine environments, understanding the genomic characteristics of Vibrio sp. F12 could provide insights into its ecological interactions. This organism may contribute to nutrient cycling or play a role in the health of marine organisms, highlighting the importance of studying its genomic features for a comprehensive understanding of its biological and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F12 strain 10N.286.45.A3 10N.286.45.A3_contig_142,

Gene Summary

Adenine Count

1498938 bp

Thymine Count

1486696 bp

Guanine Count

1174543 bp

Cytosine Count

1192341 bp

Genome Length

5371875 bp

Protein-coding Genes

4521 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
octaprenyl diphosphate synthaseFCV61_09445Not AvailablePositive2138479 - 213945035241.0
hypothetical proteinFCV61_09450Not AvailableNegative2139551 - 21397457430.83
malate dehydrogenaseFCV61_09455Not AvailableNegative2139871 - 214080632204.8
transcriptional regulator argrFCV61_09460Not AvailablePositive2141139 - 214160917054.6
taxi family trap transporter solute-binding subunitFCV61_09465Not AvailablePositive2141952 - 214292034480.0
trap transporter fused permease subunitFCV61_09470Not AvailablePositive2143176 - 214575592407.0
universal stress proteinFCV61_09475Not AvailablePositive2145863 - 214630016145.7
d-2-hydroxyacid dehydrogenaseFCV61_09480Not AvailableNegative2146405 - 214736734540.6
bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rluaFCV61_09485Not AvailableNegative2147402 - 214813628509.2
divalent metal cation transporterFCV61_09490Not AvailablePositive2148295 - 214957245531.9

Displaying genes 1871 – 1880 of 18904 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.