Vibrio sp. F12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F12 is characterized by having four replicons, indicating a complex genome structure that may contribute to its adaptability and potential metabolic versatility. The organism is documented in several sequence accessions: SYUK00000000.1, SYUL00000000.1, SYUM00000000.1, and SYUO00000000.1. These accessions provide a foundational basis for further genomic studies and bioinformatics analyses regarding this species. The presence of multiple replicons could suggest mechanisms for enhanced gene regulation and horizontal gene transfer, which are often vital for survival in diverse environments, particularly in aquatic ecosystems where many Vibrio species are found. The adaptability of Vibrio sp. F12 may allow it to thrive in varying environmental conditions, potentially impacting the microbial dynamics within its habitat. Given the ecological role of Vibrio species as both pathogens and beneficial microbes in marine environments, understanding the genomic characteristics of Vibrio sp. F12 could provide insights into its ecological interactions. This organism may contribute to nutrient cycling or play a role in the health of marine organisms, highlighting the importance of studying its genomic features for a comprehensive understanding of its biological and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F12 strain 10N.286.45.A3 10N.286.45.A3_contig_142,

Gene Summary

Adenine Count

1498938 bp

Thymine Count

1486696 bp

Guanine Count

1174543 bp

Cytosine Count

1192341 bp

Genome Length

5371875 bp

Protein-coding Genes

4521 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide chain release factor n(5)-glutamine methyltransferaseFCV61_06555Not AvailableNegative1482425 - 148328531637.5
peptide chain release factor 1FCV61_06560Not AvailableNegative1483291 - 148437940246.2
glutamyl-trna reductaseFCV61_06565Not AvailableNegative1484408 - 148566745637.9
lipoprotein localization protein lolbFCV61_06570Not AvailablePositive1485828 - 148647524409.2
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseFCV61_06575Not AvailablePositive1486457 - 148734732574.8
ribose-phosphate pyrophosphokinaseFCV61_06580Not AvailablePositive1487375 - 148831933901.8
aminoacyl-trna hydrolaseFCV61_06585Not AvailablePositive1488528 - 148911821573.3
redox-regulated atpase ychfFCV61_06590Not AvailablePositive1489129 - 149022039480.2
Trna-metNot AvailableNot AvailablePositive1490501 - 1490577Not Available
Trna-leuNot AvailableNot AvailablePositive1490645 - 1490729Not Available

Displaying genes 1311 – 1320 of 18904 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.