Pseudomonas sp. XWY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. XWY-1 is characterized by having two replicons, which are essential for its genetic stability and replication processes. The organism is cataloged under two specific accession numbers: NZ_CP026333.1 and NZ_CP026332.1, which provide resources for detailed genomic information and analysis. The presence of two replicons may indicate a complex genetic structure, potentially allowing for greater flexibility in gene expression and adaptation to various environmental conditions. This trait can be particularly advantageous in microbial ecology, as it may enhance the organism's ability to thrive in diverse habitats or respond to changes in nutrient availability. Understanding the genomic features of Pseudomonas sp. XWY-1 through its accession numbers can facilitate further studies on its metabolic capabilities and ecological roles. Genomic data can provide insights into its interactions with other microorganisms and its potential applications in biotechnology, such as bioremediation or agriculture. The dual-replicon system may also contribute to its adaptability, enabling it to occupy various ecological niches effectively. In conclusion, the two replicons of Pseudomonas sp. XWY-1 suggest a robust genetic framework that could play a significant role in its survival and ecological interactions, highlighting the importance of genomic studies in understanding microbial diversity and function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. XWY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. XWY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. XWY-1 plasmid pXWY, complete sequence.

Gene Summary

Adenine Count

87145 bp

Thymine Count

85355 bp

Guanine Count

111954 bp

Cytosine Count

110083 bp

Genome Length

394537 bp

Protein-coding Genes

417 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligasePRJ_RS22755Not AvailableNegative4867424 - 486877048116.9
phospho-n-acetylmuramoyl-pentapeptide- transferasePRJ_RS22760Not AvailableNegative4868777 - 486985939309.3
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligasePRJ_RS22765Not AvailableNegative4869859 - 487122646722.9
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligasePRJ_RS22770Not AvailableNegative4871219 - 487270953573.1
peptidoglycan d,d-transpeptidase ftsi family proteinPRJ_RS22775Not AvailableNegative4872706 - 487444563143.6
cell division protein ftslPRJ_RS22780Not AvailableNegative4874445 - 487473810800.2
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhPRJ_RS22785Not AvailableNegative4874735 - 487568234302.3
division/cell wall cluster transcriptional repressor mrazPRJ_RS22790Not AvailableNegative4875679 - 487613417035.6
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive4876443 - 4876818Not Available
16s rrna (cytidine(1402)-2'-o)-methyltransferasePRJ_RS22800Not AvailableNegative4876886 - 487776131117.5

Displaying genes 4801 – 4810 of 5738 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.