Pseudomonas sp. XWY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. XWY-1 is characterized by having two replicons, which are essential for its genetic stability and replication processes. The organism is cataloged under two specific accession numbers: NZ_CP026333.1 and NZ_CP026332.1, which provide resources for detailed genomic information and analysis. The presence of two replicons may indicate a complex genetic structure, potentially allowing for greater flexibility in gene expression and adaptation to various environmental conditions. This trait can be particularly advantageous in microbial ecology, as it may enhance the organism's ability to thrive in diverse habitats or respond to changes in nutrient availability. Understanding the genomic features of Pseudomonas sp. XWY-1 through its accession numbers can facilitate further studies on its metabolic capabilities and ecological roles. Genomic data can provide insights into its interactions with other microorganisms and its potential applications in biotechnology, such as bioremediation or agriculture. The dual-replicon system may also contribute to its adaptability, enabling it to occupy various ecological niches effectively. In conclusion, the two replicons of Pseudomonas sp. XWY-1 suggest a robust genetic framework that could play a significant role in its survival and ecological interactions, highlighting the importance of genomic studies in understanding microbial diversity and function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. XWY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. XWY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. XWY-1 plasmid pXWY, complete sequence.

Gene Summary

Adenine Count

87145 bp

Thymine Count

85355 bp

Guanine Count

111954 bp

Cytosine Count

110083 bp

Genome Length

394537 bp

Protein-coding Genes

417 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
capsular polysaccharide biosynthesis proteinPRJ_RS20525Not AvailablePositive4399598 - 440174277467.1
phytanoyl-coa dioxygenase family proteinPRJ_RS20530Not AvailablePositive4401746 - 440278938892.2
rep-associated tyrosine transposasePRJ_RS20540Not AvailablePositive4403423 - 440387817607.4
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymePRJ_RS20545Not AvailableNegative4403888 - 440524049212.0
type i polyketide synthasePRJ_RS20550Not AvailableNegative4405250 - 4412749269101.0
glucose-1-phosphate thymidylyltransferase rfbaPRJ_RS20565Not AvailableNegative4413622 - 441450332476.9
dtdp-4-dehydrorhamnose reductasePRJ_RS20570Not AvailableNegative4414500 - 441540532340.5
dtdp-glucose 4,6-dehydratasePRJ_RS20575Not AvailableNegative4415402 - 441647239841.7
polysaccharide biosynthesis proteinPRJ_RS20580Not AvailableNegative4416642 - 441863974062.8
mray family glycosyltransferasePRJ_RS20585Not AvailableNegative4418699 - 441971236270.4

Displaying genes 4381 – 4390 of 5738 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.