Tabrizicola sp. TH137

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Tabrizicola

Description

Tabrizicola sp. TH137 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its metabolic efficiency and adaptability in various environments. The organism is cataloged under the accession number PKRQ00000000.1, which allows for its identification and reference in scientific databases. While specific ecological or biological roles of Tabrizicola sp. TH137 are not detailed in the provided information, the characteristic of possessing only one replicon suggests a potential for rapid replication and growth under favorable conditions. This trait is often associated with bacteria that thrive in specific niches or environments where resource competition is significant. The presence of a single replicon may also influence the organism's genetic stability and response to environmental changes, as fewer genomic elements can lead to a more efficient regulation of essential genes. Understanding Tabrizicola sp. TH137's genomic configuration can provide insights into its ecological interactions, potential biotechnological applications, or its role in microbial communities. In summary, Tabrizicola sp. TH137's unique trait of having one replicon may reflect its evolutionary adaptations and ecological strategies, underscoring the importance of genomic architecture in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusTabrizicola
SpeciesTabrizicola sp. TH137
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tabrizicola sp. TH137 NODE_38_length_1672_cov_811.740952, whole

Gene Summary

Adenine Count

808101 bp

Thymine Count

777192 bp

Guanine Count

1444173 bp

Cytosine Count

1633981 bp

Genome Length

4663447 bp

Protein-coding Genes

4332 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit epsilonC0V75_04580Not AvailablePositive915078 - 91577925688.6
protein-export chaperone secbC0V75_04585Not AvailableNegative915815 - 91632418904.6
exclusion protein fxsaC0V75_04590Not AvailableNegative916384 - 91686917281.9
preprotein translocase subunit tim44C0V75_04595Not AvailablePositive917015 - 91768024268.9
murein transglycosylaseC0V75_04600Not AvailablePositive917680 - 91869936763.1
dna mismatch repair protein mutsC0V75_04605Not AvailablePositive918699 - 91931322864.9
hypothetical proteinC0V75_04610Not AvailableNegative919320 - 92042039672.8
hslu--hslv peptidase atpase subunitC0V75_04615Not AvailableNegative920493 - 92179148069.8
hslu--hslv peptidase proteolytic subunitC0V75_04620Not AvailableNegative921801 - 92235819525.6
thioredoxinC0V75_04625Not AvailableNegative922457 - 92278311443.8

Displaying genes 981 – 990 of 4463 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

98 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da

Displaying 1–10 of 98 metabolites

Health Effects

No health effects information available for this bacterium.