Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1097 domain-containing protein | CY658_04625 | Not Available | Positive | 983631 - 984131 | 17046.4 |
| oxidoreductase | CY658_04630 | Not Available | Positive | 984202 - 985095 | 31356.7 |
| slyx protein | CY658_04635 | Not Available | Positive | 985144 - 985368 | 8550.97 |
| hemolysin d | CY658_04640 | Not Available | Negative | 985379 - 986086 | 25196.0 |
| two-component system response regulator | CY658_04645 | Not Available | Negative | 986149 - 986712 | 20531.5 |
| histidine kinase | CY658_04650 | Not Available | Negative | 986709 - 988100 | 50297.3 |
| hypothetical protein | CY658_04655 | Not Available | Negative | 988084 - 988908 | 29584.9 |
| cytochrome o ubiquinol oxidase subunit iv | CY658_04660 | Not Available | Negative | 988908 - 989318 | 14821.4 |
| cytochrome o ubiquinol oxidase subunit iii | CY658_04665 | Not Available | Negative | 989315 - 989989 | 24811.7 |
| cytochrome o ubiquinol oxidase subunit i | CY658_04670 | Not Available | Negative | 989982 - 991988 | 74541.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
