Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative selenate abc transporter substrate-binding protein | CY658_04575 | Not Available | Negative | 972343 - 973206 | 30841.0 |
| selenide, water dikinase seld | CY658_04580 | Not Available | Positive | 973323 - 974402 | 36914.9 |
| hypothetical protein | CY658_04585 | Not Available | Positive | 974362 - 974565 | 7304.91 |
| abc transporter permease | CY658_04590 | Not Available | Positive | 974612 - 977128 | 89062.6 |
| hypothetical protein | CY658_04595 | Not Available | Positive | 977235 - 978716 | 54216.3 |
| prevent-host-death protein | CY658_04600 | Not Available | Negative | 978836 - 979060 | 8195.48 |
| lysr family transcriptional regulator | CY658_04605 | Not Available | Negative | 979112 - 980014 | 32945.8 |
| mfs transporter | CY658_04610 | Not Available | Positive | 980143 - 981669 | 51341.8 |
| lysr family transcriptional regulator | CY658_04615 | Not Available | Negative | 981808 - 982707 | 32616.3 |
| 3-ketoacyl-acp reductase | CY658_04620 | Not Available | Positive | 982833 - 983597 | 26123.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
