Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdate abc transporter permease subunit | CY658_04525 | Not Available | Positive | 962738 - 963424 | 23992.7 |
| molybdate abc transporter substrate-binding protein | CY658_04530 | Not Available | Positive | 963453 - 964202 | 26310.7 |
| abc transporter atp-binding protein | CY658_04535 | Not Available | Positive | 964199 - 964987 | 28931.0 |
| cbbbc protein | CY658_04540 | Not Available | Positive | 965277 - 967619 | 85748.8 |
| hypothetical protein | CY658_04545 | Not Available | Positive | 967616 - 967903 | 9812.76 |
| sulfurtransferase fdhd | CY658_04550 | Not Available | Positive | 967911 - 968828 | 32063.6 |
| trna 2-selenouridine(34) synthase mnmh | CY658_04555 | Not Available | Negative | 968765 - 969832 | 39111.7 |
| phosphonate abc transporter, permease protein phne | CY658_04560 | Not Available | Negative | 969872 - 970669 | 27748.5 |
| abc transporter permease | CY658_04565 | Not Available | Negative | 970666 - 971490 | 28573.8 |
| phosphonate abc transporter | CY658_04570 | Not Available | Negative | 971505 - 972329 | 28671.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
