Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_04475 | Not Available | Positive | 952749 - 953204 | 16231.9 |
| asnc family transcriptional regulator | CY658_04480 | Not Available | Negative | 953215 - 953688 | 17662.4 |
| amidohydrolase | CY658_04485 | Not Available | Positive | 953776 - 954957 | 41956.4 |
| diaminopropionate ammonia-lyase | CY658_04490 | Not Available | Positive | 954986 - 957430 | 86457.4 |
| patatin | CY658_04495 | Not Available | Negative | 957462 - 958667 | 42871.9 |
| iron-sulfur cluster carrier protein apbc | CY658_04500 | Not Available | Positive | 958762 - 959853 | 38426.7 |
| lysr family transcriptional regulator | CY658_04505 | Not Available | Positive | 959902 - 960852 | 34389.0 |
| mode family transcriptional regulator | CY658_04510 | Not Available | Positive | 960904 - 961251 | 12199.9 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | CY658_04515 | Not Available | Positive | 961248 - 961745 | 18297.8 |
| nitroreductase | CY658_04520 | Not Available | Negative | 961706 - 962542 | 30711.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
