Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_04425 | Not Available | Negative | 943197 - 943421 | 7015.58 |
| carnitine dehydratase | CY658_04430 | Not Available | Negative | 943456 - 944619 | 41622.0 |
| tripartite tricarboxylate transporter substrate binding protein | CY658_04435 | Not Available | Negative | 944616 - 945590 | 33475.2 |
| 3-hydroxybutyryl-coa dehydratase | CY658_04440 | Not Available | Negative | 945632 - 946387 | 27189.8 |
| gntr family transcriptional regulator | CY658_04445 | Not Available | Positive | 946446 - 947117 | 24360.5 |
| methionine--trna ligase | CY658_04450 | Not Available | Negative | 947136 - 949235 | 76782.7 |
| lpxa family transferase | CY658_04455 | Not Available | Positive | 949326 - 949958 | 21504.0 |
| isocitrate dehydrogenase | CY658_04460 | Not Available | Positive | 950118 - 951149 | 36388.3 |
| hypothetical protein | CY658_04465 | Not Available | Positive | 951187 - 951909 | 26159.7 |
| duf480 domain-containing protein | CY658_04470 | Not Available | Positive | 951953 - 952663 | 24855.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
