Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-carboxytetrahydropterin synthase qued | CY658_04375 | Not Available | Negative | 933487 - 933849 | 13912.7 |
| 7-carboxy-7-deazaguanine synthase | CY658_04380 | Not Available | Negative | 933908 - 934546 | 23269.7 |
| pantoate--beta-alanine ligase | CY658_04385 | Not Available | Negative | 934543 - 935385 | 31154.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | CY658_04390 | Not Available | Negative | 935405 - 936280 | 30579.3 |
| l-aspartate oxidase | CY658_04395 | Not Available | Negative | 936395 - 937978 | 57119.0 |
| segregation/condensation protein a | CY658_04400 | Not Available | Negative | 937999 - 938835 | 31821.9 |
| duf3460 domain-containing protein | CY658_04405 | Not Available | Negative | 938904 - 939110 | 8212.81 |
| outer membrane protein assembly factor bame | CY658_04410 | Not Available | Positive | 939150 - 939653 | 18661.4 |
| sodium-independent anion transporter | CY658_04415 | Not Available | Negative | 939657 - 941336 | 59445.9 |
| hydrogenase maturation protein | CY658_04420 | Not Available | Positive | 941471 - 943183 | 61108.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
