Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | CY658_04325 | Not Available | Positive | 923715 - 925736 | 71014.9 |
| molybdopterin biosynthesis protein moeb | CY658_04330 | Not Available | Negative | 925764 - 926528 | 26717.9 |
| peptidase s41 | CY658_04335 | Not Available | Negative | 926609 - 928051 | 52307.7 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | CY658_04340 | Not Available | Negative | 928175 - 928918 | 27716.8 |
| sulfurtransferase | CY658_04345 | Not Available | Positive | 928991 - 929407 | 14589.2 |
| glutaredoxin 3 | CY658_04350 | Not Available | Positive | 929429 - 929689 | 9569.64 |
| protein-export chaperone secb | CY658_04355 | Not Available | Positive | 929818 - 930282 | 16858.2 |
| glycerol-3-phosphate dehydrogenase | CY658_04360 | Not Available | Positive | 930311 - 931348 | 35153.4 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | CY658_04365 | Not Available | Positive | 931369 - 932247 | 30846.1 |
| quinolinate synthase | CY658_04370 | Not Available | Positive | 932254 - 933369 | 39990.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
