Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | CY658_04275 | Not Available | Positive | 916743 - 917624 | 31829.9 |
| duf429 domain-containing protein | CY658_04280 | Not Available | Positive | 917638 - 918462 | 29462.3 |
| transporter | CY658_04285 | Not Available | Positive | 918598 - 919092 | 16187.9 |
| hypothetical protein | CY658_04290 | Not Available | Negative | 919174 - 919686 | 18437.0 |
| hypothetical protein | CY658_04295 | Not Available | Negative | 919673 - 920056 | 13134.2 |
| hypothetical protein | CY658_04300 | Not Available | Negative | 920114 - 920488 | 13298.5 |
| duf1328 domain-containing protein | CY658_04305 | Not Available | Negative | 920543 - 920707 | 5605.34 |
| histidine kinase | CY658_04310 | Not Available | Negative | 920912 - 922282 | 50121.3 |
| dna-binding response regulator | CY658_04315 | Not Available | Positive | 922413 - 923045 | 23250.2 |
| hypothetical protein | CY658_04320 | Not Available | Negative | 923056 - 923457 | 14836.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
