Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | CY658_04225 | Not Available | Positive | 909149 - 910597 | 52050.3 |
| fmdb family transcriptional regulator | CY658_04230 | Not Available | Positive | 910703 - 911050 | 11287.0 |
| hypothetical protein | CY658_04235 | Not Available | Positive | 911063 - 911695 | 23060.3 |
| aspartate--trna ligase | CY658_04240 | Not Available | Positive | 911733 - 913541 | 67281.0 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | CY658_04245 | Not Available | Positive | 913606 - 913887 | 10727.8 |
| plasmid maintenance protein ccdb | CY658_04250 | Not Available | Positive | 913888 - 914199 | 11049.6 |
| dihydroneopterin triphosphate diphosphatase | CY658_04255 | Not Available | Positive | 914177 - 914662 | 18067.5 |
| endonuclease | CY658_04260 | Not Available | Positive | 914659 - 915423 | 28471.2 |
| gtp cyclohydrolase | CY658_04265 | Not Available | Positive | 915563 - 916300 | 27951.8 |
| blue light sensor protein | CY658_04270 | Not Available | Positive | 916304 - 916726 | 15341.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
