Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | CY658_04175 | Not Available | Negative | 896394 - 897704 | 47577.4 |
| phosphoglycerate dehydrogenase | CY658_04180 | Not Available | Positive | 897932 - 899164 | 43874.0 |
| fad-linked oxidase | CY658_04185 | Not Available | Positive | 899352 - 903230 | 142474.0 |
| hit domain-containing protein | CY658_04190 | Not Available | Positive | 903227 - 903664 | 15828.1 |
| hypothetical protein | CY658_04195 | Not Available | Negative | 903681 - 904469 | 26167.0 |
| hypothetical protein | CY658_04200 | Not Available | Positive | 904575 - 904988 | 14618.1 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | CY658_04205 | Not Available | Positive | 905157 - 905888 | 26740.3 |
| transporter | CY658_04210 | Not Available | Positive | 905930 - 906943 | 34435.7 |
| hypothetical protein | CY658_04215 | Not Available | Positive | 907001 - 907567 | 20564.6 |
| ubiquinone biosynthesis regulatory protein kinase ubib | CY658_04220 | Not Available | Positive | 907564 - 909129 | 59651.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
