Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--cysteine ligase | CY658_00050 | Not Available | Positive | 12313 - 13629 | 48276.0 |
| potassium transporter kup | CY658_00055 | Not Available | Positive | 13785 - 15653 | 67906.2 |
| hypothetical protein | CY658_00060 | Not Available | Positive | 15695 - 16981 | 43683.1 |
| glutathione synthase | CY658_00065 | Not Available | Positive | 16981 - 17934 | 34848.2 |
| tonb-dependent siderophore receptor | CY658_00070 | Not Available | Negative | 17935 - 20151 | 79109.8 |
| class ii glutamine amidotransferase | CY658_00075 | Not Available | Negative | 20267 - 21034 | 28985.1 |
| chap domain-containing protein | CY658_00080 | Not Available | Negative | 21055 - 21687 | 22944.5 |
| class ii histone deacetylase | CY658_00085 | Not Available | Negative | 21755 - 22867 | 40135.9 |
| tripartite tricarboxylate transporter substrate binding protein | CY658_00090 | Not Available | Negative | 22883 - 23866 | 34826.6 |
| amidase | CY658_00095 | Not Available | Negative | 23926 - 25383 | 52032.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
