Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | CY658_04125 | Not Available | Negative | 886234 - 886749 | 18328.7 |
| abc transporter atp-binding protein | CY658_04130 | Not Available | Negative | 886749 - 887543 | 29147.6 |
| abc transporter permease | CY658_04135 | Not Available | Negative | 887543 - 888439 | 30905.1 |
| abc transporter substrate-binding protein | CY658_04140 | Not Available | Negative | 888519 - 889484 | 32753.6 |
| lrp/asnc family transcriptional regulator | CY658_04145 | Not Available | Positive | 889710 - 890180 | 17512.5 |
| duf3772 domain-containing protein | CY658_04150 | Not Available | Negative | 890194 - 892710 | 88327.1 |
| glycerophosphodiester phosphodiesterase | CY658_04155 | Not Available | Negative | 892762 - 893508 | 26819.8 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | CY658_04160 | Not Available | Negative | 893512 - 894519 | 37027.1 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | CY658_04165 | Not Available | Negative | 894523 - 895374 | 31323.2 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | CY658_04170 | Not Available | Negative | 895414 - 896295 | 32540.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
