Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_04075 | Not Available | Negative | 876989 - 877582 | 21739.0 |
| rna pyrophosphohydrolase | CY658_04080 | Not Available | Negative | 877530 - 878198 | 26230.9 |
| proline--trna ligase | CY658_04085 | Not Available | Positive | 878334 - 880079 | 63674.7 |
| lytic transglycosylase | CY658_04090 | Not Available | Positive | 880076 - 880744 | 24656.6 |
| hlyc/corc family transporter | CY658_04095 | Not Available | Negative | 880755 - 882074 | 48847.5 |
| monothiol glutaredoxin, grx4 family | CY658_04100 | Not Available | Negative | 882167 - 882496 | 11835.3 |
| peptide chain release factor n(5)-glutamine methyltransferase | CY658_04105 | Not Available | Negative | 882529 - 883377 | 29771.3 |
| peptide chain release factor 1 | CY658_04110 | Not Available | Negative | 883377 - 884465 | 40402.9 |
| glutamyl-trna reductase | CY658_04115 | Not Available | Negative | 884565 - 885836 | 45766.1 |
| hypothetical protein | CY658_04120 | Not Available | Positive | 885948 - 886226 | 9837.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
