Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | CY658_04025 | Not Available | Negative | 868006 - 868611 | 21146.6 |
| prepilin peptidase | CY658_04030 | Not Available | Negative | 868631 - 869596 | 34162.5 |
| type ii secretion system protein f | CY658_04035 | Not Available | Negative | 869596 - 870825 | 44717.1 |
| type iv-a pilus assembly atpase pilb | CY658_04040 | Not Available | Negative | 870850 - 872583 | 62614.6 |
| Trna-pro | Not Available | Not Available | Positive | 872699 - 872775 | Not Available |
| octaprenyl diphosphate synthase | CY658_04050 | Not Available | Negative | 872825 - 873817 | 35178.2 |
| 50s ribosomal protein l21 | CY658_04055 | Not Available | Positive | 874000 - 874311 | 11196.7 |
| 50s ribosomal protein l27 | CY658_04060 | Not Available | Positive | 874324 - 874584 | 8933.88 |
| gtpase obge | CY658_04065 | Not Available | Positive | 874658 - 875734 | 38839.7 |
| glutamate 5-kinase | CY658_04070 | Not Available | Positive | 875815 - 876954 | 40281.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
