Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | CY658_03925 | Not Available | Positive | 844097 - 845035 | 34424.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit a | CY658_03930 | Not Available | Positive | 845191 - 846591 | 49564.9 |
| urease subunit alpha | CY658_03935 | Not Available | Negative | 846596 - 848314 | 60947.9 |
| urease subunit beta | CY658_03940 | Not Available | Negative | 848318 - 848623 | 11050.2 |
| urease accessory protein urej | CY658_03945 | Not Available | Negative | 848631 - 849230 | 19977.1 |
| urease subunit gamma | CY658_03950 | Not Available | Negative | 849263 - 849565 | 10877.4 |
| hybrid sensor histidine kinase/response regulator | CY658_03955 | Not Available | Positive | 849668 - 853294 | 130945.0 |
| dna-binding response regulator | CY658_03960 | Not Available | Positive | 853315 - 854322 | 36659.2 |
| hypothetical protein | CY658_03965 | Not Available | Positive | 854459 - 855097 | 22115.3 |
| threonine synthase | CY658_03970 | Not Available | Positive | 855202 - 856437 | 43114.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
