Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | CY658_03875 | Not Available | Negative | 834410 - 836812 | 87617.3 |
| hypothetical protein | CY658_03880 | Not Available | Negative | 836891 - 837547 | 24482.9 |
| porin | CY658_03885 | Not Available | Positive | 837764 - 838924 | 40141.5 |
| hypothetical protein | CY658_03890 | Not Available | Positive | 839004 - 839189 | 6231.73 |
| atp-binding protein | CY658_03895 | Not Available | Positive | 839203 - 839808 | 21007.5 |
| lysr family transcriptional regulator | CY658_03900 | Not Available | Negative | 839797 - 840762 | 35227.6 |
| quercetin 2,3-dioxygenase | CY658_03905 | Not Available | Positive | 840913 - 841791 | 31259.2 |
| urease accessory protein ureg | CY658_03910 | Not Available | Negative | 841829 - 842479 | 23497.5 |
| urease accessory protein uref | CY658_03915 | Not Available | Negative | 842501 - 843172 | 24310.7 |
| urease accessory protein uree | CY658_03920 | Not Available | Negative | 843322 - 843912 | 21281.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
