Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase | CY658_03825 | Not Available | Negative | 823800 - 825305 | 54428.6 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | CY658_03830 | Not Available | Negative | 825383 - 826699 | 47234.6 |
| dihydropyrimidine dehydrogenase | CY658_03835 | Not Available | Negative | 826769 - 828127 | 47650.9 |
| hypothetical protein | CY658_03840 | Not Available | Positive | 828099 - 829835 | 61676.5 |
| hypothetical protein | CY658_03845 | Not Available | Positive | 829618 - 830571 | 34594.1 |
| dna-binding response regulator | CY658_03850 | Not Available | Negative | 830600 - 831304 | 26083.3 |
| two-component sensor histidine kinase | CY658_03855 | Not Available | Negative | 831301 - 832881 | 57352.1 |
| hypothetical protein | CY658_03860 | Not Available | Positive | 833039 - 833308 | 9338.34 |
| hypothetical protein | CY658_03865 | Not Available | Positive | 833511 - 833735 | 7729.37 |
| dna-binding response regulator | CY658_03870 | Not Available | Negative | 833710 - 834393 | 25073.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
