Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbb3-type cytochrome oxidase assembly protein ccos | CY658_03675 | Not Available | Positive | 798297 - 798434 | 5082.25 |
| cytochrome-c oxidase, cbb3-type subunit i | CY658_03680 | Not Available | Positive | 798522 - 799964 | 53581.3 |
| cytochrome-c oxidase, cbb3-type subunit ii | CY658_03685 | Not Available | Positive | 799983 - 800627 | 23748.5 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | CY658_03690 | Not Available | Positive | 800651 - 800791 | 5159.3 |
| cytochrome-c oxidase, cbb3-type subunit iii | CY658_03695 | Not Available | Positive | 800806 - 801720 | 32567.6 |
| cytochrome c oxidase accessory protein ccog | CY658_03700 | Not Available | Positive | 801717 - 803141 | 53549.4 |
| nitrogen fixation protein fixh | CY658_03705 | Not Available | Positive | 803153 - 803443 | 10491.7 |
| hypothetical protein | CY658_03710 | Not Available | Positive | 803440 - 803682 | 8593.58 |
| oxygen-independent coproporphyrinogen iii oxidase | CY658_03715 | Not Available | Positive | 803679 - 805085 | 51637.9 |
| hypothetical protein | CY658_03720 | Not Available | Positive | 805090 - 805791 | 23792.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
