Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_05115 | Not Available | Positive | 1055863 - 1056165 | 11262.1 |
| Lysozyme | CY658_05120 | Not Available | Positive | 1056165 - 1056647 | 17906.6 |
| Attr | Not Available | Not Available | Positive | 1060534 - 1060576 | Not Available |
| 1,4-alpha-glucan branching enzyme | CY658_00015 | Not Available | Negative | 928 - 3111 | 81161.0 |
| alpha-glucosidase | CY658_00020 | Not Available | Negative | 3117 - 4778 | 61346.2 |
| fad-dependent oxidoreductase | CY658_00025 | Not Available | Positive | 4909 - 6393 | 53351.1 |
| leucine--trna ligase | CY658_00030 | Not Available | Positive | 6481 - 9111 | 97673.5 |
| hypothetical protein | CY658_00035 | Not Available | Positive | 9147 - 9668 | 18947.0 |
| dna polymerase iii subunit delta | CY658_00040 | Not Available | Positive | 9689 - 10759 | 38805.8 |
| glutamate-5-semialdehyde dehydrogenase | CY658_00045 | Not Available | Positive | 10835 - 12127 | 45706.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
