Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spore coat protein | CY658_03570 | Not Available | Negative | 773532 - 774056 | 17795.2 |
| diguanylate phosphodiesterase | CY658_03575 | Not Available | Positive | 774452 - 775141 | 25130.5 |
| pilus assembly protein pilb | CY658_03580 | Not Available | Negative | 775160 - 777058 | 69654.5 |
| diguanylate cyclase | CY658_03585 | Not Available | Negative | 777105 - 779828 | 99893.7 |
| hypothetical protein | CY658_03590 | Not Available | Negative | 780017 - 780280 | 9376.42 |
| sigma-70 family rna polymerase sigma factor | CY658_03595 | Not Available | Positive | 780728 - 781252 | 19592.4 |
| hypothetical protein | CY658_03600 | Not Available | Positive | 781249 - 782250 | 36318.9 |
| tonb-dependent receptor | CY658_03605 | Not Available | Positive | 782429 - 784819 | 84653.1 |
| hypothetical protein | CY658_03610 | Not Available | Positive | 784821 - 786215 | 48162.2 |
| serine hydrolase | CY658_03615 | Not Available | Positive | 786272 - 787945 | 59178.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
