Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl co-a mutase-associated gtpase meab | CY658_03520 | Not Available | Positive | 763073 - 763984 | 32663.6 |
| laci family transcriptional regulator | CY658_03525 | Not Available | Positive | 763996 - 764955 | 33293.2 |
| hypothetical protein | CY658_03530 | Not Available | Positive | 764918 - 765286 | 13348.2 |
| abc transporter permease | CY658_03535 | Not Available | Positive | 765323 - 766570 | 44589.6 |
| isopenicillin n synthase family oxygenase | CY658_03540 | Not Available | Positive | 766639 - 767727 | 40703.8 |
| aldehyde dehydrogenase | CY658_03545 | Not Available | Positive | 767729 - 769165 | 50461.8 |
| 3-oxoacyl-acp reductase | CY658_03550 | Not Available | Positive | 769179 - 769931 | 25986.5 |
| hypothetical protein | CY658_03555 | Not Available | Negative | 769945 - 770538 | 20162.1 |
| fimbrial biogenesis outer membrane usher protein | CY658_03560 | Not Available | Negative | 770427 - 772772 | 83369.8 |
| hypothetical protein | CY658_03565 | Not Available | Negative | 772750 - 773505 | 27225.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
