Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine dioxygenase | CY658_03420 | Not Available | Negative | 740673 - 741521 | 31962.0 |
| luxr family transcriptional regulator | CY658_03425 | Not Available | Negative | 741749 - 744433 | 97033.8 |
| arac family transcriptional regulator | CY658_03430 | Not Available | Negative | 744487 - 745527 | 37977.8 |
| alpha/beta hydrolase | CY658_03435 | Not Available | Positive | 745668 - 746231 | 20013.0 |
| porin | CY658_03440 | Not Available | Positive | 746291 - 747529 | 42963.0 |
| alcohol dehydrogenase | CY658_03445 | Not Available | Negative | 747582 - 748553 | 34204.4 |
| abc transporter substrate-binding protein | CY658_03450 | Not Available | Positive | 748753 - 749724 | 34098.0 |
| taurine dioxygenase | CY658_03455 | Not Available | Positive | 749756 - 750598 | 31555.7 |
| transposase | CY658_03460 | Not Available | Positive | 750652 - 751710 | 38627.2 |
| arac family transcriptional regulator | CY658_03465 | Not Available | Negative | 751798 - 752838 | 38608.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
