Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_03325 | Not Available | Positive | 718064 - 719920 | 66351.5 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 718509 - 718605 | Not Available |
| alpha/beta hydrolase | CY658_03330 | Not Available | Negative | 719934 - 720848 | 32142.1 |
| arac family transcriptional regulator | CY658_03335 | Not Available | Positive | 721149 - 722189 | 38436.1 |
| alpha/beta hydrolase | CY658_03340 | Not Available | Positive | 722743 - 723522 | 29079.8 |
| dicarboxylate--coa ligase pima | CY658_03345 | Not Available | Positive | 723563 - 725275 | 61809.7 |
| wax ester/triacylglycerol synthase family o-acyltransferase | CY658_03350 | Not Available | Positive | 725316 - 726935 | 58302.6 |
| mfs transporter | CY658_03355 | Not Available | Positive | 726984 - 728324 | 48626.2 |
| phasin family protein | CY658_03360 | Not Available | Positive | 728370 - 728819 | 16689.8 |
| porin | CY658_03365 | Not Available | Negative | 728859 - 730163 | 45099.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
