Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein parb | CY658_03275 | Not Available | Positive | 705090 - 705986 | 33234.4 |
| chromosome partitioning protein parb | CY658_03280 | Not Available | Positive | 705983 - 706885 | 33508.0 |
| hypothetical protein | CY658_03285 | Not Available | Negative | 707340 - 707654 | 12184.7 |
| integrase | CY658_03290 | Not Available | Negative | 707946 - 709148 | 44216.1 |
| hypothetical protein | CY658_03295 | Not Available | Positive | 710619 - 712898 | 85099.4 |
| oxidoreductase | CY658_03300 | Not Available | Negative | 713438 - 714187 | 25725.2 |
| tetr family transcriptional regulator | CY658_03305 | Not Available | Positive | 714393 - 714983 | 21406.4 |
| hypothetical protein | CY658_03310 | Not Available | Negative | 715106 - 716764 | 55337.8 |
| hypothetical protein | CY658_03315 | Not Available | Positive | 717004 - 717354 | 11827.9 |
| dna-binding response regulator | CY658_03320 | Not Available | Positive | 717459 - 718067 | 21486.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
