Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | CY658_05065 | Not Available | Positive | 1044649 - 1044957 | 11546.7 |
| Hypothetical protein | CY658_05070 | Not Available | Positive | 1044972 - 1045265 | 11194.1 |
| Tail tape-measure protein | CY658_05075 | Not Available | Positive | 1045270 - 1048662 | 118205.0 |
| hypothetical protein | CY658_05080 | Not Available | Positive | 1048659 - 1049585 | 32037.2 |
| Minor tail protein | CY658_05085 | Not Available | Positive | 1049582 - 1050445 | 30964.6 |
| Cell wall-associated hydrolase | CY658_05090 | Not Available | Positive | 1050442 - 1050861 | 15491.7 |
| Gene transfer agent host specificity protein | CY658_05095 | Not Available | Positive | 1050858 - 1054058 | 113406.0 |
| Hypothetical protein | CY658_05100 | Not Available | Positive | 1054058 - 1054876 | 27583.4 |
| hypothetical protein | CY658_05105 | Not Available | Positive | 1055110 - 1055460 | 12160.2 |
| hypothetical protein | CY658_05110 | Not Available | Positive | 1055519 - 1055863 | 11698.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
