Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| very short patch repair endonuclease | CY658_03025 | Not Available | Negative | 654415 - 654825 | 16212.9 |
| dna (cytosine-5-)-methyltransferase | CY658_03030 | Not Available | Positive | 654935 - 656149 | 45121.7 |
| restriction endonuclease | CY658_03035 | Not Available | Positive | 656233 - 656859 | 22986.2 |
| hypothetical protein | CY658_03040 | Not Available | Positive | 656871 - 657614 | 27501.1 |
| hypothetical protein | CY658_03045 | Not Available | Positive | 657908 - 660325 | 89405.0 |
| hypothetical protein | CY658_03050 | Not Available | Positive | 660333 - 661355 | 36409.6 |
| hypothetical protein | CY658_03055 | Not Available | Positive | 661814 - 662644 | 31579.2 |
| integrase | CY658_03060 | Not Available | Negative | 663111 - 663974 | 31022.9 |
| hypothetical protein | CY658_03065 | Not Available | Negative | 664506 - 665243 | 28312.2 |
| hypothetical protein | CY658_03070 | Not Available | Negative | 665240 - 665953 | 26788.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
