Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 615126 - 615202 | Not Available |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | CY658_02825 | Not Available | Negative | 615274 - 616155 | 31584.8 |
| hypothetical protein | CY658_02830 | Not Available | Negative | 616152 - 616697 | 18807.2 |
| hypothetical protein | CY658_02835 | Not Available | Negative | 616698 - 618551 | 67365.4 |
| formamidopyrimidine-dna glycosylase | CY658_02840 | Not Available | Positive | 618623 - 619438 | 29943.6 |
| dynamin family protein | CY658_02845 | Not Available | Positive | 619540 - 621513 | 73399.1 |
| a/g-specific adenine glycosylase | CY658_02850 | Not Available | Positive | 621548 - 622588 | 38280.2 |
| rnase adapter rapz | CY658_02855 | Not Available | Negative | 622605 - 623477 | 32599.1 |
| dna repair protein recn | CY658_02860 | Not Available | Negative | 623483 - 625165 | 59772.6 |
| nad kinase | CY658_02865 | Not Available | Negative | 625203 - 626108 | 32611.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
