Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_02720 | Not Available | Negative | 596566 - 597516 | 34853.3 |
| hypothetical protein | CY658_02725 | Not Available | Negative | 597934 - 598200 | 9472.4 |
| tetratricopeptide repeat-containing protein | CY658_02730 | Not Available | Negative | 598409 - 599785 | 49441.9 |
| 4-oxalocrotonate tautomerase | CY658_02735 | Not Available | Negative | 599836 - 600234 | 14297.0 |
| lysr family transcriptional regulator | CY658_02740 | Not Available | Positive | 600362 - 601225 | 30653.3 |
| glycosyl transferase family 1 | CY658_02745 | Not Available | Negative | 601272 - 602423 | 42217.1 |
| hypothetical protein | CY658_02750 | Not Available | Negative | 602425 - 603189 | 28162.1 |
| hypothetical protein | CY658_02755 | Not Available | Negative | 603186 - 603689 | 18626.2 |
| hypothetical protein | CY658_02760 | Not Available | Negative | 603652 - 604554 | 33408.5 |
| amidase | CY658_02765 | Not Available | Negative | 604725 - 606128 | 50137.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
