Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | CY658_02670 | Not Available | Positive | 588476 - 589138 | 23130.9 |
| pantetheine-phosphate adenylyltransferase | CY658_02675 | Not Available | Positive | 589182 - 589685 | 18523.4 |
| allophanate hydrolase | CY658_02680 | Not Available | Positive | 589726 - 590373 | 22666.2 |
| allophanate hydrolase | CY658_02685 | Not Available | Positive | 590370 - 591368 | 34578.7 |
| hypothetical protein | CY658_02690 | Not Available | Positive | 591425 - 592165 | 26265.4 |
| pyroglutamyl-peptidase i | CY658_02695 | Not Available | Positive | 592171 - 592842 | 23648.6 |
| alpha/beta hydrolase | CY658_02700 | Not Available | Negative | 592852 - 593580 | 26374.2 |
| histidine phosphatase family protein | CY658_02705 | Not Available | Positive | 593666 - 594364 | 25788.4 |
| hypothetical protein | CY658_02710 | Not Available | Negative | 594441 - 595358 | 34256.1 |
| hypothetical protein | CY658_02715 | Not Available | Negative | 595607 - 596245 | 23608.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
